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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015828963.1_cds_XP_016503560.1_17093
CDS Infomation

[gene=LOC107821638] [db_xref=GeneID:107821638] [protein=tRNA pseudouridine(38/39) synthase-like] [protein_id=XP_016503560.1] [location=complement(join(32037..32092,33088..33162,33318..33425,34157..34280,34885..35002,35858..35988,36080..36140,36595..36688,36973..37060,37468..37578,37946..37991,38872..38944,39253..39337,39417..39476,39578..39634))] [gbkey=CDS]
Sequence

ATGGACCTCGTAGCATCCCTACAGTCGGAACTCGAGACTCTTCGAAGCAGGATTAAGGAA
TTGGAATCGGAAAATGTTAAATTATCTGCTCGGCTCTCGCATTGCAGTTGTCAAGAGACA
AAGGAGAAAAGTAACGGTAGCCTTGAGAAGAACGGAGTTTTGGATGGTCATGGAAAGAAG
AAAAATAAGCTCAGAGATTTAGGCTGTGGCACAATGGTGATGCATCAGTTCCCAAAAAGA
TATGTCGCTTTGAAAGTCATGTATTTTGGTCCAAGGTTTTATGGTTTTGCTTCGGAGGCT
CAAATGGATCCCACTGTTGAGGGTGAACTTTTCAAAGCTCTAAAGAGGACAAGACTCATA
TTTGGAGATAAGAGGGAATTGCAGTACTCAAGATGTGGTAGAACAGACAAGGGAGTTTCC
TCTGTTGGACAAGTGATTTCTCTCTTCTTAAGGTCAAAACATAGGGAGTCAAGAGGAGAC
AATAAGTATTCTGGGGAAATTTCTGTTGAAGAATCTTGTGGAGAAATGGACTATGTGAGG
TTACTAAACCAAGTCCTGCCAAATGACATTCGCATTATGGGCTGGTCTCCTATTCCAGTT
GGTTTCAGTGCAAGGTTCAGTTGTTTGAGCAGGGTGTACAAGTACTTCTTTTGGCATAGG
AATTTGAATATAACAGCAATGGAAACTGCTGCTGAGAAATTTTTAGGGGAACATGATTTC
AGAAATTTTTGCAAAATGGACGCAGGCAATGTGCACAACTACCGGAGGCACATAATATCA
TTTGAAATTCTCCCCTTTAATGAAAGTTACAAAGATGATCAACTCATGATTATGAAAATC
AAAGGTAGTGCTTTCCTTTGGCATCAAATCCGGTGTATGGTTGCTGTACTATTTCTGATT
GGCCAGGGTCTTGAGTCCCCTAATGTAATAGATGCACTACTGGATATTGAAAGAACACCA
CGGAAACCTCAGTTCCTAATGGCTCCAGAGATACCTCTAGTTCTTCAATCTTGTGAATTT
GAGGGTCTCAAATTTATTTGTTCATCAGATGCAAAGCAGGCTTTGAATGAACATTTGGAG
CGGGAATGCCGAAGTTATAAACTTCAAGCCGCAATTTTTCATGAAGCTATGCTAAGCTCT
TCATCTGTTGAAATTGACAACAATATATCAAGTGACCGTACTAAGAAGAAAGAAGCTTCC
CACACTCCTCTACTATCTCGACCAACTGAGCCATCATACGAAGAGCGGCGTAAAAAGCTG
GATGCAGGAGCTAGAACACGTAGATAG

Peptide Sequence

PEP ID

XP_016503560.1
PEP Infomation

PREDICTED: tRNA pseudouridine(38/39) synthase-like [Nicotiana tabacum]
Sequence

MDLVASLQSELETLRSRIKELESENVKLSARLSHCSCQETKEKSNGSLEKNGVLDGHGKK
KNKLRDLGCGTMVMHQFPKRYVALKVMYFGPRFYGFASEAQMDPTVEGELFKALKRTRLI
FGDKRELQYSRCGRTDKGVSSVGQVISLFLRSKHRESRGDNKYSGEISVEESCGEMDYVR
LLNQVLPNDIRIMGWSPIPVGFSARFSCLSRVYKYFFWHRNLNITAMETAAEKFLGEHDF
RNFCKMDAGNVHNYRRHIISFEILPFNESYKDDQLMIMKIKGSAFLWHQIRCMVAVLFLI
GQGLESPNVIDALLDIERTPRKPQFLMAPEIPLVLQSCEFEGLKFICSSDAKQALNEHLE
RECRSYKLQAAIFHEAMLSSSSVEIDNNISSDRTKKKEASHTPLLSRPTEPSYEERRKKL
DAGARTRR

Transcript Sequence

Gene sequence data has not been registered.